International Journal Papers

MRPrimerW2: an enhanced tool for rapid design of valid high-quality primers with multiple search modes for qPCR experiments

Jeon H., Bae, J., Hwang, S.-H., Whang, K.-Y., Lee, H.-S.., Kim, H., and Kim, M.-S.
Nucleic Acids Research (NAR), https:doi.org10.1093nar/gkz323, 2019 (ISSN: 0305-1048, SCI, IF=11.562, co-corresponding author).

Weakly supervised lesion localization for agerelated macular degeneration detection using optical coherence tomography images

Yang, H.-L., Kim, J. J., Kim, J. H., Kang, Y. K., Park, D. H., Park, H. S., Kim, H. K., and Kim, M.-S.
PLOS ONE, 14(4), e0215076, 2019 (ISSN: 1932-6203, SCI, co-corresponding author).

A parallel query processing system based on graph-based database partitioning

Nam, Y.-M., Han, D., and Kim, M.-S.
Information Sciences, Vol. 480, pp.237–260, April 2019 (ISSN : 0020-0255, SCI, IF=4.832, corresponding author).

GMiner: A Fast GPU-based Frequent Itemset Mining Method for Large-scale Data

Chon, K.-W., Hwang, S.-H., and Kim, M.-S.
Information Sciences, Vol. 439–440, pp.19–38, May 2018 (ISSN : 0020-0255, SCI, IF=4.832, corresponding author).

BIGMiner: A Fast and Scalable Distributed Frequent Pattern Miner for Big Data

Chon, K.-W. and Kim, M.-S.
Cluster Computing, Vol. 21, Issue 3, pp.1507-1520, DOI: 10.1007/s10586-018-1812-0, Feb. 9, 2018 (ISSN: 1386-7857, SCIE, IF=2.040, corresponding author).

SSDPrimer: an SSD-based primer design method for a private sequence DB

Chon, K.-W., Hwang, S.-H., An, K., and Kim, M.-S.
Int. J. Data Mining and Bioinformatics, Vol. 18, No. 3, pp.252-267, Sept. 2017 (ISSN: 1748-5673, SCIE, corresponding author).

MRPrimerV: A database of PCR primers for RNA virus detection

Kim, H., Kang, N., An, K., Kim, D., Koo, J., and Kim, M.-S.
Nucleic Acids Research (NAR), Vol. 45, Issue D1, pp.D475-D481, Jan. 2017 (ISSN: 0305-1048, SCI, IF=10.162, co-corresponding author).

MRPrimerW: A tool for rapid design of valid high-quality primers for multiple target qPCR experiments

Kim, H., Kang, N., An, K., Koo, J., and Kim, M.-S.
Nucleic Acids Research (NAR), Vol. 44, Issue W1, pp.W259-W266, July 2016 (ISSN: 0305-1048, SCI, IF=10.162, co-corresponding author).

MRPrimer: a MapReduce-based method for the thorough design of valid and ranked primers for PCR

Kim, H., Kang, N., Chon, K., Kim, S., Lee, N., Koo, J., and Kim, M.-S.
Nucleic Acids Research (NAR), Vol. 43, Issue 20, e130, Nov. 2015 (ISSN: 0305-1048, SCI, IF=10.162, co-corresponding author).

DSP-CC: I/O Efficient Parallel Computation of Connected Components in Billion-scale Networks

Kim, M.-S., Lee, S., Han, W.-S., Park, H., and Lee, J.-H.
IEEE Transactions on Knowledge and Data Engineering (TKDE), Vol. 27, No. 10, pp. 2658-2671, 2015 (ISSN: 1041-4347, SCI, IF=2.476).

Olfactory Marker Protein Expression Is an Indicator of Olfactory Receptor-Associated Events in Non-Olfactory Tissues

Kang, N., Kim, H., Jae, Y., Lee, N., Ku, C. R., Margolis, F., Lee, E., Bahk, Y. Y., Kim, M.-S., and Koo, J.
PLOS ONE, Vol. 460, No. 3, pp. 616-621, 2015 (ISSN: 1932-6203, SCI, IF=3.53, co-corresponding author).

Olfactory Receptor Olfr544 responding to Azelaic Acid Regulates Glucagon Secretion in <alpha>-cells of Mouse Pancreatic Islets

Kang, N., Bahk, Y. Y., Lee, N., Jae, Y., Cho, Y. H., Ku, C. R., Byun, Y., Lee, E. J., Kim, M.-S., and Koo, J.
Biochemical and Biophysical Research Communications (BBRC), online published, 2015 (ISSN: 0006-291X, SCI, co-corresponding author).

Enhanced chained and Cuckoo hashing methods for Multi-core CPUs

Kim, E. and Kim, M.-S.
Cluster Computing, Vol. 17, pp. 665–680, Jan. 2014 (ISSN: 1386-7857, SCIE, IF=1.510, corresponding author).

Leveraging spatial join for robust tuple extraction from web pages

Han, W., Kwak, W., Yu, H., Lee, J., Kim, M.-S.
Information Sciences, Vol. 261, pp. 132-148, Mar. 2014 (ISSN : 0020-0255, SCI, IF=3.893, corresponding author).

DB-IR integration using tight-coupling in the Odysseus DBMS

Whang, K., Lee, J, Lee, M., Han, W., Kim, M.-S., Kim, J.
World Wide Web Journal, Vol. 18, No. 3, pp. 491-520, May 2015 (ISSN: 1573-1413, SCIE).

Business Analytics in (a) Blink

Barber, R., Bendel, P., Czech, M., Draese, Q., Ho, F., Hrle, N., Idreos, S., Kim, M.-S., Koeth, O., Lee, J., Li, T.T., Lohman, G., Morfonios, K., Mueller, R., Murthy, K., Pandis, I., Qiao, L., Raman, V., Sidle, R., Stolze, K., Szabo, S.
Data Engineering, IEEE Computer Society, Vol. 35, No. 1, pp. 9–14, March 2012.

Tightly-Coupled Spatial Database Features in the Odysseus/OpenGIS DBMS for High-Performance

Whang, K., Lee, J., Kim, M.-S., Lee, M., Lee, K., Han, W., and Kim, J.
GeoInformatica, Vol. 14, No. 4, pp. 425–446, Oct. 2010 (ISSN: 1384-6175, SCIE).

Structural Consistency: Enabling XML Keyword Search to Eliminate Spurious Results Consistently

Lee, K., Whang, K., Han, W., and Kim, M.-S.
The VLDB Journal, Vol. 19, No, 4, pp. 503–529, Aug. 2010 (ISSN: 1066-8888, SCI).

A Logical Model and Data Placement Strategies for MEMS Storage Devices

Kim, Y., Whang, K., Kim, M.-S., and Song, I.
IEICE Trans. on Information and Systems, Vol. E92-D, No. 11, pp. 2218–2234, Nov. 2009 (ISSN: 0916-8532, SCIE).

The Partitioned-Layer Index: Answering Monotone Top-k Queries Using the Convex Skyline and Partitioning-Merging Technique

Heo, J., Whang, K., Kim, M.-S., Kim, Y., and Song, I.
Information Sciences, Vol. 179, No.9, pp. 3286–3308, Sept. 2009 (ISSN: 0020-0255, SCI).

Structural Optimization of a Full-Text n-Gram Index Using Relational Normalization

Kim, M.-S., Whang, K., Lee, J., and Lee, M.
The VLDB Journal, Vol. 17, No, 6, pp. 1485–1507, Nov. 2008 (ISSN: 1066-8888, SCI).

n-Gram/2L-Approximation: A Two-Level n-Gram Inverted Index Structure for Approximate String Matching

Kim, M.-S., Whang, K., and Lee, J.
Journal of Computer Systems Science and Engineering, Vol. 22, No. 6, pp. 26–40, Nov. 2007 (ISSN: 0267-6192, SCIE).